>Alouatta_only_Locus_6
GGCCGGG-CACGGTGGCTCACACCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GGGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGCACGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTAAGGCAGGAGAATTGCTTGAACCC-AGGAGACAGAGGTTGTGG
TGAGCCGAGATCGCACCATTGCACTC-------CAGCCTGGGT-------AACAAGGGCG
AAACCCCGTCTCAAAAAA
>Alouatta_only_Locus_9
??????????????GGCTCACACCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGCACAT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATCGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Aotus_only_Locus_17
GGCCGGG-CACGGTAGCTCATACCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATAAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACAAGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGACGCGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCAGAGGTTGCGG
TGAGCCGAGATNGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Callithrix_only_Locus_98
GGCTGGG-CACGGTGGCTCACGCCTATAATCCCAGC-ACTTTGGGAGGCAGATGCGGATG
GATCAC--GAGGTCAAGAGATCGAGATCATCCTGGTCAACAAGGTGAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGTGCAC------ACCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGAAGGCAGAGGTTGCGG
TAAGCCAAGATCATGCCATTGCACTC-------CAGTCTGGGT-------AACAACAGCG
AAACTCCATCTCAAAAAA
>Callithrix_and Saguinus_Locus_58
GRCCGGG-CGCKGTGGCTYACGCCTRTAATCCCAGC-ACTTKGGGAGGCCGAGGCGGGTG
GMTCAC--GAGRTCAAGAGATCGAGACCATCCTGGTCAACAAGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGTGKGC------GCCTGTAGTCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCTTGAACCG-AGAWGGCGGAGGTTGTGG
TGAGCTGAGATCGTGCCATTGCACTC-------CAGYCTGGGT-------AACAACAGCG
AAACTCCATCTCAAAAAA
>Pitheciid_Locus_88
GGCCGGG-CGCAGTGGCTCACGCCTATAATCTCAGC-ACTCTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGTCAACATGGTGAAANCCCCGTCTC-
TACTAAAAA------------TNCA-----------------------------------
AAAA----------------TTAGCTGGGCGTGGTGGTGCAC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGAGGCGGAGGTTGTGA
TGAGCCGAGATCACGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCA
AAACTCCGTCTCAAAAAG
>Pitheciid_Locus_155
GGCCGGG-TGCGCTGGCTCACACCTATAATCCCAGC-ACTTTGGGAGGCCGAGGTGGGTG
GATCAT--GAGGTCAAGAGATCAAGACCATCCTGGTCAACATGGTGAAACCCC-GGCTC-
TAGTAAAAA------------TACA-----------------------------------
AAAAAAAAAA----------TTAGCTCGGCATGGTGGTGCAT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTAAGTCAGGAGAATTGCTTGAACCC-AGGAGGCAGAGGTTGCAG
GGAGCTGAGATCACGCCATTGCACTC-------CAGCCTGGGT-------AACAAGATCG
AAACTCCATCTCAAAAAA
>Atelid_Locus_32
GGMCGGG-AGCGGTGGTTCACGCCTATAATCCCAGC-ACTTTGRGAGGCCGAGGTGGGTG
GATCAC--GAGGTCAAGAGRTCGAGACCATCCTGGTCAACATGGTGAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGCGYAW------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGAGGCGGAGGTTGCAG
TGAGCCGAGATCGCGYCATTGCACTC-------CAGCCTGGGY-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Saimiri_only_Locus_69
CGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGTGGGTG
GATCAC--GAGGTCGAGAGATCGAGACCATCCTGGTCAACGTGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCGCGT------GCCTGTAGTCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATTGTGCCATTGCACTC-------CAGCCAGGGT-------AGCAAGAGCG
ACACTCTGTCTCAAAAAA
>Saimiri_only_Locus_70
?GCCGGG-TACGGTGGCTCATGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGAGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCT-GTCTC-
TACTGAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCACGGTGGCGCAC------GCTTATAGTCCC
AGCTATTC-GG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGAGGCGGAGGTTGCAG
TGAGCTGAGATTGTGCCATTGCACTC-------CAGCCTGGGT-------AAC--GAGCG
AAACTCCATCTCAAAACA
>AluTa11_Consensus
GGCCGGG-CGCGGTGGCTCACGCCTRTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGCGCGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATCGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Spacer
============================================================
============================================================
============================================================
============================================================
============================================================
============================================================
==================
>Callithrix_and_Saguinus_Locus_47
-GCCAGG-CGCAGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCAAGGTGGATG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TAGTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGG-ATGT------GCCTGTAATCTC
AGCTACTCAGG-TGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGTGGAGGTTGCGG
TGAGCCGAGATCACACCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCTGTCTCAAAAAA
>Callithrix_and_Saguinus_Locus124
??????????CGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCAAGGTGGGTG
GATCAC--CAGGTCAAGAGATCAAGACCATCCTGGTCAACATGGTGAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
TAAAA---------------TTAGCTGGGCACGGTGGCATGT------ACCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCAGAGGTTGCGG
TGAGCCGAGATCATGCCATTGCACTC-------CAGCCTGGTT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Aotus_only_Locus_12
GGCCAGG-TGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGAG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------CACA-----------------------------------
AAAAA---------------TTAGCTGGACATGGTGGCGTGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGTGG
TGAGCCGAGATCGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAACA
>Saimiri_only_Locus_71
GGCCGGG-TGCAGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCTGAGGCGGGTG
GATCAT--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TATTAAAAA------------CACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCACGT------GCCTGTGATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGTGG
TGAGCCGAGATCGCACCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Aotus_only_Locus_11
GGCCGGG-CGCGTTGGCTCAAGCCTGTAATCCCAGT-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TCAGCTGGGCACGGTGTAGTGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
GGAGCCGAGATCGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAAAGCG
AAATATCATCTCAAAAAA
>Callithrix_and_Saguinus_Locus125
GGCCGGG-TGTGGTGGCTCAAGCCTGTAATC--------TTTGGAACGCTGAGGTGGGTG
GATCAC--GAGGTCAAGAGATCAAGACCATCCTGATCAACATGGTGAAACCCC-ATCTC-
TACTAAAAC------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCACGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATCGCACCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCA
AAACTCCGTCTCAAAAAA
>Callithrix_and_Saguinus_Locus111
AGCCGGG-CGTGGTGGTTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GGTCAC--GAGGTCAAGAGATTGAGACCATCCTGGTCAACGTGGTGAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCTTGGTGGTGCAC------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCAGAGGTTGCGG
TGAGCTGAGATCGCGCCATTGCACTC-------CAGCCTGGGT-------AATAAGAGTG
AAACTCCGTCTCAAAAAA
>Callithrix_and_Saguinus_Locus_81
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCAASGTGGGTG
GATCAC--GAGGTCAAGAGATCGAGAYCGTCCTGGTCAACATGGTGAAACCCC-ATCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTKGGCAWGGTGGCGCGT------GCCTGTARTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCCTGAACMC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATTGSGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCYGTCTCARAAAA
>Callithrix_and_Saguinus_Locus_57
GGCCGGG-CACGGTGGCTCACGCCTGTAATCTCAGC-ACTTTGGGAGGCCGAGGCAGTTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGATCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAAA-------------TTAACTGGGCATGGTGGCGCAT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-AGGTGGCGGAGGTTGCAG
TGAGCCGAGACCGCGCTATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTTCATCTCAAAAAA
>Callithrix_and_Saguinus_Locus_4
GGCTGGG-TTCAGTGGCTCACNCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCAAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TNCA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGTGCGT------NCCTGTAATCCC
AGCTACTCAGG-TGGCTGAGGCAGGAGAATTNCCTGAACCC-AGGAGGCTGAGGTTGCGG
TGAGCAGAGATGGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Callithrix_only_Locus_93
GGCTGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCAAGACCATTCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCACGT------GCCTGTAATCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATTGTGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Callithrix_only_Locus_91
GGCCCGG-CCCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCTGAGGCGTGTG
GATCAT--GAGGTCAAGAGATTGAGACCGTCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCGCAT------GCCTGTTATCCA
AGCTATTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGTGGAGGTTGCGG
TGAGCCGAGATCCCGCCATTGCACTC-------CAGCCTGGGT-------AACA---GCG
AAACTCCGTCTCAAAAAA
>Callithrix_only_Locus_74
GGCCGGG-CACGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAACAGATCGAGACCATCCTGGTCAAAATGGTGAAACTCT-GTTTC-
TACTAAAGA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCGCGT------GCCCGTAATCCC
AGCTGCTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGTGGAGGTTGCGG
TGAGCCGAGATCACGCCATTGCACTC-------CAGCCTGGGT-------AACAAAAGCG
AAACTCCGTCTCAAAAAA
>Callithrix_only_Locus_50
GGCCAGG-CATGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGTCGAGGCAGGTG
GATCAC--AAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TGCA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGTGCGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-GGGAGGCAGAGGTTGCTG
TGAGCCGAGATCACGCCATTGCACTC-------CGGCCTGGGT-------AACAAGAGCG
AAACTCCATCTCAAAAAA
>Saimiri_only_Locus_158
GGCCGGG-CGCGGTGGCTCACGCCTGTGATCCCAGC-ACTTTGGGAGGCTGAGGCAGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACGTGGTGAAACCCC-GTCTCC
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCGTGC------GCCTGTAATCCC
AGCAACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGACGGAGGTTGTGG
TGAGCCGAGATCGCGCCATTGCACTT-------CAGCTTGGGC-------CACAAGAGTG
AAACTCCGTCTCAAAAAA
>Saimiri_only_Locus_156
GGCCGGG-CGCGGTGGCTTACGCCTTTAATCCCAGC-ATTTTGGGAGGCCAAGGCGGGTG
GATCAC--GAAGTCGAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TCAGCTGGCCACGGTGGCGCAT------GCCTGTAATCCC
AACTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATTGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Saimiri_only_Locus_137
GGCTGGG-CACGGTGGCTCACACCTGTAATCCCAGC-ACTTTGGGAGGCAGAGGAGGGTG
GATCAC--GAGGTCAGGAGATCGAGAGCATCCTGGTCA-CATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TCATCTGGGCATGGTGGCGCGT------GCCTGTAATGCC
AGCTACTCAGG-AGGCTGAGGCGGGAGAATTGCCTAAACCC-AGGAGGCGCAGGTTGCGG
TGAGCCGAGACCGTGCCATTGTACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAT
>Saimiri_only_Locus_133
GGCCGGG-CACGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--AAGGTCAAGAGATCGAGACCATCCTAGTCAACAAGGTGAAACCCC-GTCTC-
TACTCAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCGCAT------GCCTGTAATCCC
AGCAACTCAGG-AGGCTGAGGCAGAAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCAAGATCGCACCACTGCACTC-------CGGCCTGGGT-------AGCAAGAGCG
AAACTCCATCTCCAAAAA
>Aotus_only_Locus_79
?GCCGGG-CGCGGTGGCTCAGGCCTATAATCCCAGC-ACTTTGGGAGGCCGAGGGGGGTG
GATCAC--GAGGTTAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAAAAAAAAA-------TTAGCTGGGCATGGTGGCATGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGGGGCAGGAGAATTGCTTGAACCC-GGGGGGCGGAGGTTGCGG
TGAGCTGAGATTGTGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTTTCAAAAAA
>Aotus_only_Locus_16
GGCCGGG-CATGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGATGAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGTATGT------GCCTATAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGGACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATCATGCCATTGCACTC-------CAGTCTGGGT-------AACAAGAGCA
GAACTCCGTCTCAAAAAA
>Aotus_only_Locus_13
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
GAAAA---------------TCAGCCGGGCATGGTGGCGCGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGTAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCCAGATCGCGCAATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCATCTCAAAAAA
>AluTa16_Consensus
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCATGGTGGCGCGT------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCCTGAACCC-AGGAGGCGGAGGTTGCGG
TGAGCCGAGATCGCGCCATTGCACTC-------CAGCCTGGGT-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>Spacer
============================================================
============================================================
============================================================
============================================================
============================================================
============================================================
==================
>Lagothrix_and_Ateles_Locus_45
GGCCGGG-TGCAGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCA
GATCAC--GAGGTCAAGAGATGGAGACCATCCTGGCCAACATGGTGAAACCCC-ATCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCTGGGTGTGGTGGTGTGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCT-GGGAGGCAGAGGTTGCAG
TGAGCCGAGGTCACGCCACTGCACTC-------CAGCCTG-GCACCTGGTGACA-GAGTG
AGACTCTGTCTCAAAAAA
>Pitheciid_Locus_169
GGCTGGG-CACGGCGGCTCACACCTGTAATCAGAGC-ACTTTGGGAGGCTGAGGCAGGCA
GATCAT--GAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-ACCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCTGGGCGTGGTAGCATGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCT-GGGAGGCGGAGGTTGCAG
TGAGCCGAGGTCACACCACTGCACTC-------CAGCCTG-GCTCCTGGTGACA-GAATG
AGACTCTGTCTCAAAAAA
>Lagothrix_and_Ateles_Locus_23
???????????????CCTCACACCTGTAATCCCAGC-ACTTTGGGAGGCTGAGGYRGGCG
GATCAY--GAAGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGAAACCCC-GTCTC-
TACCAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCTGGGTGTGGTGGCRYGY------GCCTGTAGTCCC
AGCYACTCGGG-AGGCTRAGGCAAGAGAATTGYTTGAACCC-AGGCRGCGGAGGTTGCAG
TGAGCGGAGGTCACAYCACTGCACTC-------CAGCCTG-GCACCTGGTGACG-GAGTA
AGACTCTGTCTCAAAAAA
>Atelid_Locus_46
GGCCGRG-CKCGGTGRCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCAAGGCWGGTG
GATCAC--GAGGTCAAGAGATSGAGACCATCCTGGYCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TASC-----------------------------------
AAAAAA--------------TTAGCTGGGCGTGGTGGCGCGC------GCCTGTAGTCCC
AGCTRCTCGGG-AGGCTGAGGCAATAGAATTGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGGTCGCGCCACTGSACTC-------CAGCCTG-GTGCCTGGTGACG-GAGTG
AGACTCTGTCTCAAAAAA
>Atelid_Locus_42
GGCAGGA-CGAAGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCTGGGCGTGGTGTTGCGC------ACCTGTAGTCCC
AGCTACTTGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCT-GGGAGGCGGAGGTTGCAG
TGAGCCGAGGTTGCGCCACTGCACTC-------CAGCCTG-GCGCCTGGTGACG-GAGTG
AGACTCTGTCTCAAAAAA
>Atelid_Locus_24
GGCCAGG-CGTGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGTGGGTG
GATCAC--AAGGTCAAGAGATCGAGACCATCCTGGCCAACACGGTAAAATCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCAGGCGTGGTGGCGTGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAACTGCTTGAACCC-GGGAGGCAAAGGTTGCAG
TGAGCCGAGATTGTGCCACTGCATTC-------CAGCCTG-GTGCCTGGCAACA-GATCG
AGACTCCGTCTCAAAAAA
>Atelid_Locus_25
??????????????????????????????????????CTTTGGGAGGCTGAGGCGGGCA
GATCAC--AAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-ATCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAA----------------TTAGCTGGGCGTGGTGGCGCAC------GCCTGTAGTTCC
AGCCAGTTGGG-AGGCTGAGGTAGGAGAATTGCTTGAACCC-AGGAGGCGGAGACTGCAG
TGAGCTGAGATTGCGCCACTGCACTC-------CAGCCTG-GCGCCTGGCAACA-GAGCA
AGACTCTGTCTCAAAAAA
>AluTa5_Consensus
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCTGGGCGTGGTGGCGCGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGGTCGCGCCACTGCACTC-------CAGCCTG-GCGCCTGGTGACG-GAGTG
AGACTCTGTCTCAAAAAA
>Spacer
============================================================
============================================================
============================================================
============================================================
============================================================
============================================================
==================
>Cebid_and_Atelid_Locus_14
????????????GTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCRAGGCGGGCG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGCCA---TGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCRGGTGTGGTGGCACGY------GCCTGTGGTCCC
AGCTACTCGGG-AGGCTGAGGCGGAAGAATCGCTTGAACCC-AGGAGGCGGAGGTTGTAG
TGAGCCGAGATTGCGCCACTGCACTC-------CGGCCTG-GC-------AACA-GAGCA
AGACTCCRTCTCAAAAAA
>Lagothrix_and_Ateles_Locus_20
GGCTGGG-CGCAGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGTGGGTG
GATCAC--GAGGTCAAGAGATCGAGACCTTCCTGGCCAACATGGTGAAACCCC-ATCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAA----------------ATAGCTGGGCATGGTGGCACAT------GCCTGTGGTCCC
AGCTACTCGGG-AGGTTGAGGTGGAAGAATCGCTTGAACCC-AGGAGGCGGAGGTTGCAG
TGAGCCGAGATTGCGCCACTGCACTC-------CAGCCTG-GC-------GACA-GAGCA
AGACTCCGTCTCAAAAAA
>All_NWM_Locus_26
GGCCGGG-CGCGGTGGCTCAGGCCTGTMATCCCAGC-ACTTTGGGAGGCCGAGGTGGGCG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCTGGGCGTGGTGGCACGY------GCCTGTAGTCCC
AGCTAGTCGGG-AAGCTGAGGCGGAAGAATCGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGAYTGCGCCACTGCACTC-------CAGCCTG-GC-------GACA-GAGCA
AGACTCCGTCTCAAAAAA
>All_NWM_Locus_22
?GCCGAGAAGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGTGGGCA
GATCAC--GAGGTCGGGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-DTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCGTGGTGGTGCGC------ACCTGTAGACCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATCGCTTGAACCC-AGGAGGTGGAGGTTGCAG
TGAGCCGAGATTGTGCCACTGCACTC-------CAGCCTG-GC-------GACA-GAACA
AGACTCCGTCTCAAAAAA
>All_NWM_Locus_36
GGCCGGG-CACAGTGGCTCATGCCTGTAATCCCAGC-ACTTTGGGAAGATGAAGCGGGCA
GATCAC--AAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACMCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAA----------------TTAGCTGGGCATGGTGGTGCAC------GCCTGTAGTCTC
AGCTACTTGGG-AGGCTGAGGCAGGAGAATCACTTCAATYC-GGAAGGCGGAGAGGGCTG
TGAGCCGAGATCATGCCACTGCACTC-------CAGCCTG-GC-------AACA-GAGCA
AGACTCCATCTCAAAAAA
>Callicebus_only_Locus_83
?GCTGGA-TGCGGTGGCTCACGCCTATAATCCCAGC-ACTTTGGAAGGCCGAGGCGGATG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAG------------TACA-----------------------------------
AAAAA---------------TGAGCCGGTCGTGGTGGTGCGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCACGAGAACTGCTTGAAACC-GGAAAACGGAAGTTGCAG
TGAGCCGGGATCGCGCTACTGCACCT-------CAGCCTG-GC-------GATA-GAGCG
AGACTCTGTCTCAAAACA
>Pithecia_only_Locus_46
?GCCGGG-TGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAAGAGATCAAGACCATCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAG------------TACA-----------------------------------
AAAAA---------------TGAGCCGGGCGTGGTGGTGCGTGCGCGTGCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATTGCTCGAAACC-GGAAAACGGAAGTTGCAG
TGAGCCGGGATCGCGCCACTGCACTC-------CAGCCTG-GC-------GATA-CAGCG
AGACTCTGTCTCAAAAAA
>Spacer
============================================================
============================================================
============================================================
============================================================
============================================================
============================================================
==================
>All_NWM_Locus_1
GGCCGGG-CATGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCAGGTG
GACCACTTGAGGTTGGGAATTTGAGACCAGCCTGACAAACATGGAAAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCCGGGCATGGTGGCACAT------GCCTGTAATCCC
AGCTACTCTGG-AGACTAAGGCAGGAGAATCRCTTGAACCC-AGGAAGCAGAGGTTGTGG
TGAGCCAAAATCACACCATTGCACTC-------CAGCCTAAGC-------AACAAGAGCA
AAACTCTGTCAAAAAAAA
>All_NWM_Locus_15
GGCCGGG-CACGGTGGCTCATGCCTGTAATCCCAGC-ACTT-GGGAGGCCGAGGCCGGCA
GATCAT--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCT-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGGCGGGCGTGGTGGCACGCT-----GCCTGTAGTCCC
AGCTACTTGGG-AGGCTGAGGCAGGAGAATCACTTGAACCC-AGGAGGCAGAGGTTGCAG
TGAGCCAGGATCGCCCCACTGCACTC-------CAGCCTGGGC--------------GCA
AGACTCCATCTCAAAAAA
>All_NWM_Locus_31
GGCCGGG-CACGGTGGCTCACGCCTGTAATCCCAAC-ACTTTGGGAGGCCGAGGCGGGAG
GATCAT--GAGGTCAGGAGTTCGAGACCAGCCTGGCCAGCATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCTGGGCGTGGTGGCATGY------GCCTGTAATCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATTGCTTGAACCC-GGGAGGCAGAGGTTGCAG
TGAGCCGAGATGGCGCCATTGCACTC-------CAGCCTGGGT-------GACG-GGACG
AGGCTCTGTCTCAGAAAA
>Spacer
============================================================
============================================================
============================================================
============================================================
============================================================
============================================================
==================
>Tarsier_3
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGAG
GATTGCTTGAGCYCAGGAGTTCGAGACCAGCCTGGGCAACAYAGCGAGACCTC-GTCTC-
TACAAAAAA------------TWAA-----------------------------------
AAAAA---------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAGTYCC
AGCTACTCGGR-AGGCTGAGGCGGRAGGATCGCCTGAGCCC-AGGAGGTCGAGSCTGCGG
TGAGCCGTGATCGTGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Tarsier_0
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-MCTTTGGGAGGCCGAGGCGAGWG
GATTGCCTGAGCCCGCGGGTTCGAGACCAGCCTGGGCAACTTGGCGAGACCTC-GTCTC-
TACAATAAA------------TMAA-----------------------------------
AAAAA---------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAGTTCC
RGCTACTTGGA-AGGCTGAGGCGGAAGGATCGCCKGAGCCC-AGCAGGTCGAGGCTGCGG
TG-GCCGKGAGCGTGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Tarsier_2
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCGGAGGCGAGAG
GATTGCCTGAGCCCAGGGGTTCGAGACCAGCCTGGGCAACTTGGCGAGACCTC-GTCTC-
TACAATAAA------------TMAA-----------------------------------
AAAAA---------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAGTTCC
AGCTACTTGGA-AGGCTGAGGCGGAAGGATCGCCTGAGCCC-AGCAGGTCGAGGCTGCGG
TG-GCCGTGAGCGTGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Tarsier_1
GGCCGGG-CGCGGTGGCTCACGCCTATAATCCCAGC-ACTTTGGGAGGCCGAGGTGAGAG
GATTGCCTGAGCCCACGGGTTCGAGACCAGCCTGGGCAACTTGGCGAGACCTC-ATCTC-
TACAATAAA------------TMAA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGT------GCCTGTAGTTCC
AGCTACTTGGA-AGGCTGAGGCGGAAGGATCGCCTGAGCCC-AGCAGGTCGAGGCTGCGG
TG-GCCGTGAGCGTGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>AluJo
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGAG
GATTGCTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATAGCGAGACCCC-GTCTC-
TACAAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGGATCGCTTGAGCCC-AGGAGTTCGAGGCTGCAG
TGAGCTATGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACCCTGTCTCAAAAAA
>AluJb
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGAG
GATCACTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGGTGAAACCCC-GTCTC-
TACAAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGGATCGCTTGAGCCC-GGGAGGTCGAGGCTGCAG
TGAGCCGTGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACCCTGTCTCAAAAAA
>AluSx
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAATCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATCGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>AluSc
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATCGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGG-C-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>AluSq
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGGGC------GCCTGTAATCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATCGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>AluSp
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAATCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATCGCTTGAACCC-GGGAGGCGGAGGTTGCGG
TGAGCCGAGATCGCGCCATTGCACTC-------CAGCCTGGGC-------AACAAGAGCG
AAACTCCGTCTCAAAAAA
>AluSg
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAA----------------TTAGCCGGGCGTGGTGGCGCGC------GCCTGTAATCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATCGCTTGAACCC-GGGAGGCGGAGGTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>AluY
RGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGTGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Hominid_AluYe5
RGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCCCGGGGGGCGGAGCCTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA------
GGACTCCGTCTCAAAAAA
>Homo_only_AluYa5
?GCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGTAGTGGCGGGC------GCCTGTAGTCCC
AGCTACTTGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCCCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Homo_only_AluYb8
?GCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAT--GAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAAGCGGAGCTTGCAG
TGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Homo_only_AluYb9
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGTG
GATCAT--GAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTGGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAAGCGGAGCTTGCAG
TGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Homo_only_AluYa5a2
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAA--------------TTAGCCGGGCGTAGTGGCGGGC------GCCTGTAGTCCC
AGCTACTTGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCCCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Homo_only_AluYd6
RGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCA------------CGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCAGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGAAGGCGGAGCTTGCAG
TGAGCGGAGATCGCGCCACAGCACTC-------CCGCCTGGGC-------GACA-GAACG
AGACTCCGTCTCAAAAAA
>Hominid_AluYd3
RGCCGGG-CGCGGTGGCTCACGCTTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCA------------CGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGAGAGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Hominid_AluYc2
RGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGTGGTAGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Hominid_AluYc1
RGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGTGGTAGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>All_Cercopithecinae_963_7_1
GGCCGGG-CGCGGTGGCTCAASCCTGTAATCCCAGC-MCTTTGGGAGGCCGAGACAGGCG
GRTCAC--GAGGTCAKAAGATCGAGMCCATCCTGGCTAACMCGGTGAAATCCC-RTCTY-
TACTAAAAAAAAAAAAAAAAATACA-----------------------------------
AAAAA---------------CTASYCGGGYGAGGTGGCGGGC------SCCTGTAGTCCC
WGCTACTCGGG-AGGCTGANCCAGGATAATGGCGTAACCCC-AGGAGGCGGAGCTTGCAG
TGAGCTGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>All_Cercopithecinae_963_5_1
GGCCAGG-CGCGGTGGCGCMCCCCTGTAATCCCAGC-MCTTNGGG-GGCCAAGGAGGGTA
GATATT--AAGGTCAGGAGATAGAGMCCATCCTGGCTAACCCGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTASCCGGGCGTGGTGGCGGGC------CCCTGTAGTCCC
AGCTACTCGGA-AGGCTGAGGCAGGAGAATGGCGTGAACGT-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCMCCGCTGCACTC-------CAGCCTAGGC-------AAC--CAGNG
AGACTCCGTCTCAAAAAA
>All_Cercopithecinae_46RE
GGCCGGG-CGCGGTGGCTCATGCCTGTAATCCCAGC-ACTTTGGGAGGCTGAGACAGGCG
GATCAC--GAGGTCMGGAGATTGASACCATCCTGGCTAACATGGKGAAATCCC-GTCTC-
YACTAATCAA-----------TACA-----------------------------------
AAAAAAAAAAAAAAAAAAAATTAG-CGGACGTGGTGGCGGAC------GCCTGTAGTTCC
AGCAACTCGGG-AGGCTGAKCCAGGAGAATGGCGYGAACCC-CRGAGGTGGAGCTTGCAG
TGAGCCGAAGTTGCGCCACTGCACTC-------CAGCCTGGAC-------GAAA-GAGCG
AGMCTCCGTCTCAAGAAA
>All_Cercopithecinae_Vervet9
GGCCGGG-CGCAGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCA
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGCCTAACACGGCGAAACCAC-GTCTC-
TACTAAAAAAA----------TACA-----------------------------------
AAAAA---------------CTAGCCAGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGYAG
TGAGTGGAGATCTGGCCACTGCACTC-------CAGCCTGGGC-------AACA-GAACG
AGACTC-------AACAA
>Cercothithecini_PY2_11
TGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACAGGTG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCGAACACAGTGAAACCCC-GTCTC-
TACTAAAAC------------TACA-----------------------------------
AAAAAAAA------------CTAGCCGGGCGCAGTGGCGGGT------GCCTGTGGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCATGAACCC-GGGAGGCGTAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Macaques_only_184_3_1
AGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACT-----------------------------------
AAAAAA--------------CTAGCCGGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCAAGATCACGCCACTGCACTC-------TAGCCTGGGC-------GGCA-GAGCG
AGACTCTGTCTCAAAAAA
>Macaques_only_YdjPT8
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCAGAGGCGGGCG
GATCAC--AAGGTCAGGAGATCGAGACCA------------CGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCGGTTGTGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCANGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>All_OWM_184_7_1
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGTCGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCGTGGCTAACACGGTGAAACCCT-GTCTC-
TACTAAAAA------------CACA-----------------------------------
AAAAA---------------CTAGCCGGTCGTAGTGACAGGC------ACCTGTAATCCT
AGCTACTCCGG-AGGCTGAGGTAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGAGGAGATCATCCCTCTGCACTC-------CAGCCTGGAC-------GACA-GAGCG
AGACTCCGCCTCAAAAAA
>All_OWM_184_8_2
GGCCGGG-TGTGGTGGCTCACACCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCA
GATCAT--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGTGTG-TGGTGGGC------CCCCATAATCCC
AGCTGTTCGGG-AGGCTGAGGCGGGAGAATGGCATGAACCC-AGGAGGCAGAGCTTGCAG
TGAGCTGAGATCTGGACACTGCACTC-------CAGTCTGGGC-------AACA-AAGAG
AGACTCCATCTCAAAAAA
>All_OWM_PYJX95
GGCCGGG-TGCCGTGGCTCACGCCTGTAATVCCAGC-ACTTTGGGAGGCCGAGGTGGGTG
GATCAC--GAGGTCAGGACATCGAGACCATCCTGGCTAACACGGTGAAACCCC-ATCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAACA---------------TTAGCTGGGCATGGTGGTGGGC------GCCTGTAGTCCC
AGTTACTCAGG-AGGCTGAGGCAGGAGAATGGCGTGAATCC-GGGAGGTGGAGCTTGCAG
TGAGCCGAGATTGCACCACTGCACAC-------CAGCCTGGGT-------GACA-GAGAC
AGACTCCATCTCAAAAAA
>Papionina_Yd_68
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--AAGGTCAGGAGATCGAGACCA------------CAGTGACAACCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTTGCCGGGCGCGGTGGTGGGC------GGCTGTAATCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCATGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGCACTC-------CAGCCTGGGC-------GGCA-GAGCG
AGACTCCGTCTCAAAAAA
>Nasalis_and_Pygathrix_PY2_13RE
GGCCGGG-CGCGGTGGCTCAAGCCTRTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--KAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAAAA----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGRGGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCTGGGC-------SGCA-GAGCG
AGACTCCGTCTCAAAAAA
>Nasalis_and_Pygathrix_PY2_22
GGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGTG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCAAACATGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAG---------------CTAGCCCGGCGAGGTGGCGGGC------GCCTRTAGTCCC
AGCTACTCAGG-AGSCTGAGGCAGGAGAATGGCGTAAACCC-GGGAGGCGGAGCTTGCAG
TGAGCTGAGATCCGGTCACTGCACTC-------CAGCCCGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAMA
>Nasalis_and_Pygathrix_N6
GGCCAGG-CGCGGTGGCTSAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGYCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCARGASAATGGCGTAAACCC-GGRAGGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCTGSGC-------GACA-GAGCG
AGACTCCAYCTCAAAAAA
>Nasalis_and_Pygathrix_Yd_20
GGCCGGG-CGCKGTGGCTCAAGCCTGTAATYCCAGC-ACTTTGGGAGGCCGAGACCGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGTGGTGGCGGGC------GCCTGTAGTCCC
TGMTACTCTGG-AGGCTGAGGCAGGAGAATGGCATAAACCC-GGGAGGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCCRGGC-------GACA-GAGCA
AGACTYCGTCTCAAAAAA
>Nasalis_and_Pygathrix_Yd_36
CRCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGYG
GATCAC--AAGGTCAGGAGATCGAGACCATCCTGGCTRACAYGGTGAAACCCC-GTCTC-
TACTAAAAAG-----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATGGCGTGARCCT-GGGAGGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCTTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>All_Langurs_PY2_3
GGCCGGG-CGCGRTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCMGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGAMCATSCTGGCTAACATGGTGAAACCYC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAA---------------CTAGCCGRGCGAGGTGGCGGGC------RCCTGTWWTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCAGGATCCGGCCACTACASTC-------CAGCCTGGGT-------GACA-GAGCG
AGACTCCATCTCRAAAAA
>All_Langurs_Yd_10
TGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--AAGGTCAGGAGATCGAGACCA------------CGGTGAAACCCC-ATCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATGGCGCGAACCC-GGGAGGCAGAGCTTGCAG
TGAGCCGAGATCGCGCCACTGNACTC-------CAGCCTGGGC-------AACA-GAGCG
AGACTCTGTCTCAAAAAA
>All_Langurs_Yd_1
GGCCGGG-CGCGGTGGCTCAANCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACMCGGTGAAACCCC-GTCTN-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------CTANCCGGGCGAGGTGGYGGCM-------CCTGTAGTCCC
AGCTACCCRGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GCAAGGCGGAGCTTGCAG
TGAGCTGAGATCTGGCCACAGCACTC-------CAGCCTGGGT-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>All_Langurs_Yd_11
GGCCGGG-CGCAGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACAGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAAAAAAAAAAAAAAA--CTAGCCGGGCGACAAGGYAGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTAAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCAAGATCCGGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>All_Langurs_PY2_28
GGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--AAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAA---------------CTAGCCAGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCTGAGATCTGGCCACTGCACTC-------CAGCTTGGGT-------GACA-GAGCG
AGACTCCGTCTCAAACAA
>Pygathrix_only_Yd_15
GGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCC-GTCTC-
TACTAAAAAAAAA--------TACA-----------------------------------
AAAAAA--------------CTAGCCGGGCGAGGTGGTGGGC------GCCTGTAGTCCC
AGCTACTCCGG-AGGCTGAGGCAGGAGAATAGCGTGAACCC-GGGAAGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCGTCTCACAAAA
>Colobinae_Yd_16
GGCCGGG-CGCRGTGGCTCACGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGGCAGGCG
GATCAC--AAGGTCAGGAGATYGAGACCA------------CGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAA---------------TTAGCCGGGCGCGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCAGG-AGGCTGAGGCAGGAGAATGGCCTGAACCC-GGGAGGCGGAGCTTGCAG
YSAGCCGAGATCGTGCCACTGCACTC-------CAGCCTGGGT-------GACA-GAGCG
AGACTCCGTCTCAAAAAA
>Colobinae_Yd_8
??????????????????????????????????????????GGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCTC-GTCTC-
TACTAAAAGAA----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGAGGTGGCGGGC------ACCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGAAGGAGAATGGCGTAAACCC-AGGAGGTGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCTGGGC-------GACA-GAGCG
AGACTCCATCTCAAAAAA
>Colobus_only_Yd_14
AGCCGGG-CGCGGTGGCTCACGCCTGTAATCCCAAC-ACTTTGGGAGGCCGAGGCGGGCG
GATCAC--AAGGTCAGGAGATCGAGACCA------------CGGTGAAACCCC-GTCTC-
TACTAAAAA------------TACA-----------------------------------
AAAAAAAAA--------------GCCGGGCGCCGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGACTGAGGCAGGAGAATGGCGGGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCCGAGATAGCGCCACTGCACTC-------CAGCCTGGTG-------GACA-GAGTG
AGACTCCGTCTCAAAAAA
>Nasalis_only_PY2_24
GGCCGGG-CGTGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGACTAACACGGTGAAACCCC-GTCTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGAGGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCCGG-AGGCTGAGGCCAGAGAATGGCGTAAACCC-GGGGGGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCCCTGCACTC-------CAGCCTGGGC-------GGCA-GAGCG
AGACTCCATCTCAAAAAA
>Trachypithecus_cristatus_Yd_9
AGCCGGG-CGCGGTGGCTCAAGCCTGTAATCCCAGC-ACTTTGGGAGGCCGAGACGGGCG
GATCAC--GAGGTCAGGAGATCGAGACCATCCTGGCNAANACGGTGAGACCCC-GTNTC-
TACTAAAAAA-----------TACA-----------------------------------
AAAAA---------------CTAGCCGGGCGACGAGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGACAGGAGAATGGCGTGAACCC-GGGAGGCGGAGCTTGCAG
TGAGCTGAGATCCGGCCACTGCACTC-------CAGCCTGGGT-------GGCA-GAGCA
AGACTCCGTCTCCNANAA
>Lemur_E
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCTAGC-ACTCTGGGAGGCCGAGGCGGGHG
GATCGYTYGAGSTCAGGAGTTCGAGACCAGCCTGAGCAAGA--GCGAGACCCC-RTCTC-
TACTAAAAA------------TAGAAAGAAATTATMTGGMCARCTAAAAATATATATAGA
AAAAA---------------TTAGCCGGGCATGGTGGCGCAT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGRCAGKAGGATYGCTTRAGCYC-AGGAGTTTGAGGTTGCTG
TGAGCTAGGCTGACGCCACGGCACTC---ACTCTAGCCCGGGC-------AACA-GAGCG
AGACTCCGTCTCAAAAAA
>Prosimian_E
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCTAGC-WCTCTGGGAGGCCGAGGCGGGHG
GATYGYTYRAGSTCAGGAGTTCGARACCAGCCTGAGCAAGA--GCGAGACCCC-GTCTC-
TACTAAAAA------------TAGAAAGAAATTARYCGGACARCTAAAAATATA--TAGA
AAAAA---------------TTAGCCGGGCATGGTGGCGCRT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGKAGGATCGCTTGAGCCC-AGGAGTTTGAGGTTGCTG
TGAGCTAGGCTGACGCCACGGCACTC---ACTCTAGCCMGGGC-------AACA-GAGCG
AGACTCCGTCTCAAAAAA
>Lemur_S
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCTAGC-ACTCTGGGAGGCCGAGGCGGGAG
GATYGCTCGAGSTCAGGAGTTCGAGACCAGCCTGAGCAAGA--GCGAGACCCC-GTCTC-
TACTAAAAA------------TAGA-----------------------------------
AAAA----------------TTAGCCGGGTGTGGTGGCGCGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAAGAGGATCGCTTGAGCCC-AGGAGTTTGAGGTTGCTG
TGAGCTATGATGACGCCACGGCACTC-------TAGCCCGGGC-------AACA-GAGCG
AGACTCCGTCTCAAAAAA
>Prosimian_S
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCTAGC-ACTCTGGGAGGCCGAGGCGGGAG
GATYGCTTSAGSTCAGGAGTTCGAGACCAGCCTGAGCAAGA--GCGAGACCCC-GTCTC-
TACTAAAAA------------TAGA-----------------------------------
AAAAA---------------TTAGCCGGGCATGGTGGCGCGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCAGGAGGATCGCTTGAGCCC-AGGAGTTTGAGGTTGCTG
TGAGCTAKGMTGACGCCACKGCACTC-------TAGCCCGGGC-------AACA-GAGCG
AGACTCCGTCTCAAAAAA
>Galago
GGCCGGG-CGCGGTGGCTCACGCCTGTAATCCTAGC-ACTCTGGGAGGCCGAGGCGGGWG
GATYGCYTGAGCTCASGRGTTCGAGACCAGCCTGAGCMAGA--GCGAGACCCC-GTCTC-
TACTAAAAA------------TAGA-----------------------------------
AAAA----------------TTAGCCGGGCGTKGTGGCGGGC------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGCARGAGGATCGCTTGAGCCC-ARGAGTTKGAGGTTGCTG
TGAGCTAGGATGACGCCACAGCACTC-------TASCMAGGGC-------GACA-GAGCG
AGACTCT-TCTCAAAAAA
>7sLBx2
-GCCGGG-CGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTC-GGGAGGCTGAGGTGGGAG
GATCGCTTGAGCCCAGGAGTTCTGGGCCAGCCTGAGCAACATAGCGAGACCCC-GTCTC-
T-----------------------------------------------------------
-----------------------GCCGGGCGCGGTGGCGCGT------GCCTGTAGTCCC
AGCTACTCGGG-AGGCTGAGGTGGGAGGATCGCTTGAGCCC-AGGAGTTCTGGGCTGTAG
TGCGCTATGATCGCGCCACTGCACTC-------CAGCCTGAGC-------AACA-TAGCG
AGACCCCGTCTCTAAAAA